BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011D03LP1|AL426198
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 636 0.0
>3x_Contig1801
Length = 57606
Score = 636 bits (306), Expect = 0.0
Identities = 621/762 (81%)
Strand = Plus / Plus
Query: 11 acacaacaacctgggggaagaagaaacgaccacggcccccgcagcaggccggkgaaacac 70
||||||||||||| |||| |||||||||||||| |||||||| || || |||||||
Sbjct: 5431 acacaacaacctgttggaataagaaacgaccacgtcccccgcatcattcctttgaaacac 5490
Query: 71 agccagaggaaakckgcaaaggatgggcgaakgcgacggagcgggaaggacccaagtacg 130
||||||| |||| | ||||| |||| ||||| | || || | | |||||||||||||||
Sbjct: 5491 agccagatgaaatctgcaaatgatgtgcgaattctactgatctgtaaggacccaagtacg 5550
Query: 131 ccagagcgagatgcggggacgaaggaaaaggckacggcagaakkakkcaaagaaatkakc 190
| | | |||||| || ||||||||||||||| ||||||||| | ||||||||| | |
Sbjct: 5551 ctatatcgagattcgttgacgaaggaaaaggctacggcagaattattcaaagaaattatc 5610
Query: 191 agcggcaagaaackgaagcaacggtkcagagggaaaaaacggaaagagggagagaakgaa 250
|||| |||||||| ||||||||||| |||||| ||||||| ||||||| | | || |||
Sbjct: 5611 agcgtcaagaaactgaagcaacggttcagaggtaaaaaactgaaagagttatataatgaa 5670
Query: 251 kkkgacakgagagkagcggakkacagagkgcaccakkgakgaccaagggkccggggcgca 310
|||| || || |||||| |||||| ||||| | |||||| | || |||| ||
Sbjct: 5671 tttgacatgatagtagcggattacagagttcaccatttattaccaagtgtcctgggctca 5730
Query: 311 ackktckaccgggcgaatagaaagckgccgkgkgkggkaagaakggcaaaacaaatgaaa 370
|| || |||| |||||||||||| |||| | | ||||| | |||||||||| |||
Sbjct: 5731 actttctaccgttcgaatagaaagctgccgtttgttgtaagaatgtcaaaacaaattaaa 5790
Query: 371 gagaaagggtccaaaakgaaggaagagkgggacccaaaagacgggaaagcacaaggaaag 430
|||||||| ||||||| ||||||||| | ||||||||| ||| ||||||||||| ||||
Sbjct: 5791 gagaaaggttccaaaatgaaggaagattgtgacccaaaatacgtgaaagcacaagtaaag 5850
Query: 431 gccakakgkmagaakaccggggkgcgaccaaacaaagacaacggggkaagcaktaaaagk 490
||| | | |||| ||| || | |||||||||||||||| | ||||| |||||
Sbjct: 5851 tccatatgtaagaatacctggtttctaccaaacaaagacaactgtttaagcattaaaatt 5910
Query: 491 ggggaaagcggcggacatgcggaggcggaatkaakggcgaatgcagaagaggggagagac 550
||||||| ||||| |||||| |||||||||| || ||||||||||||||| | || ||||
Sbjct: 5911 ggggaaatcggcgtacatgctgaggcggaattaatggcgaatgcagaagatgtgatagac 5970
Query: 551 gkgckgggtgacagagcaaaaaagccacaaggggggggcagcaaagaggggaaaagcgcc 610
| | |||||||| |||||||||||||||| ||| ||| |||||| ||||||| | ||
Sbjct: 5971 tttctgtgtgacagatcaaaaaagccacaaggtgggtgcatcaaagatgggaaaatctcc 6030
Query: 611 gcgagagggggcaagacgagcaacagtckgagcgkaccaagatggaagavacgagaacaa 670
| | | | |||||| |||||||||| |||| ||||| |||||||| || |||||||
Sbjct: 6031 tctatatttgtcaagactagcaacagtctgagcttaccaatatggaagaaactagaacaa 6090
Query: 671 gaatcaatcgaggacgatgaagaaattaggctatgaaacaactccaattggtcttacatg 730
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6091 gaatcaatcgatgacgatgaagaaattaggctatgaaacaactccaattggtcttacatg 6150
Query: 731 tactttaatttaagaataaaaatactattatagawccctctc 772
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6151 tactttaatttaagaataaaaatactattatagaaccctctc 6192
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2919
Number of Sequences: 1807
Number of extensions: 2919
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.2 bits)